BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G03SP1|AL428433
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1468 1645 0.0
>3x_Contig1468
Length = 9852
Score = 1645 bits (829), Expect = 0.0
Identities = 829/829 (100%)
Strand = Plus / Minus
Query: 1 cgtcagtcttgttatcgaacgaaaaggccgctttggaagctgacttggtatcttcagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2231 cgtcagtcttgttatcgaacgaaaaggccgctttggaagctgacttggtatcttcagtct 2172
Query: 61 tattgccaaaagaaaacccaggcttggattcggtatcgtcagcattcgtgttcaaggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2171 tattgccaaaagaaaacccaggcttggattcggtatcgtcagcattcgtgttcaaggatc 2112
Query: 121 ccagagaaaatcccattttagaggcaggtttagattcttctgttttagatcccagagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 ccagagaaaatcccattttagaggcaggtttagattcttctgttttagatcccagagaaa 2052
Query: 181 atccacttttggtctcctctttactgttgccagatttaacattgaatgcaaaaccctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 atccacttttggtctcctctttactgttgccagatttaacattgaatgcaaaaccctgtt 1992
Query: 241 tactttctggtttgtcattggaaggtttagagggttcaggagccactggttttgatccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 tactttctggtttgtcattggaaggtttagagggttcaggagccactggttttgatccaa 1932
Query: 301 agctgaaggctggcttaccggcttgttctgtcccagagggctttgctccgaaagaaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 agctgaaggctggcttaccggcttgttctgtcccagagggctttgctccgaaagaaaatg 1872
Query: 361 ctggtttagcatctgtaggcttgtcctccgtttttgaaccaaatgagaatcctgtctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1871 ctggtttagcatctgtaggcttgtcctccgtttttgaaccaaatgagaatcctgtctttg 1812
Query: 421 cgcctgaggttttttcttcaggttttgatcccagacttagcgaaaaacttggcttgttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 cgcctgaggttttttcttcaggttttgatcccagacttagcgaaaaacttggcttgttgg 1752
Query: 481 catctccagcggcagaaccaaagttgaaccctgaagtagcaccggctggttttgtatcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 catctccagcggcagaaccaaagttgaaccctgaagtagcaccggctggttttgtatcag 1692
Query: 541 tgtggttcccaccaaagagtgatgtggcatttgtattaggtttcgaggtttcagttggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 tgtggttcccaccaaagagtgatgtggcatttgtattaggtttcgaggtttcagttggtt 1632
Query: 601 tagcggaagttgtgaagcttgatgttgaagttgtattggcaccaaatattggtttagagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 tagcggaagttgtgaagcttgatgttgaagttgtattggcaccaaatattggtttagagg 1572
Query: 661 cattgacactcggagttgtagtcattgcattatttccagatagtccgaaattaaaagcgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 cattgacactcggagttgtagtcattgcattatttccagatagtccgaaattaaaagcgg 1512
Query: 721 gctttgcatcggtcttttgttcaggttgtgtaccaaatgagaatccactcttgggttgag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 gctttgcatcggtcttttgttcaggttgtgtaccaaatgagaatccactcttgggttgag 1452
Query: 781 tgtctttagcctgttgcgacccgccaaatagcgaagagctacttcctgc 829
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 tgtctttagcctgttgcgacccgccaaatagcgaagagctacttcctgc 1403
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5595
Number of Sequences: 1807
Number of extensions: 5595
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)